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Title

Authors

2010

Collection

Reference

Anatomical atlas-guided diffuse optical tomography of brain activation [New]

Custo A., Boas D.A., Tsuzuki D., Dan I., Mesquita R., Fischl B., Grimson W.E.L., Wells III W.M.

Jan-2010

NAC, NA-MIC, SPL

Neuroimage. 2010 Jan 1;49(1):561-7.

Title

Authors

2009

Collection

Reference

3D Nonrigid Registration via Optimal Mass Transport on the GPU [New]

Rehman T.u., Haber E., Pryor G., Melonakos J., Tannenbaum A.

Dec-2009

NAC, NA-MIC

Med Image Anal. 2009 Dec;13(6):931-40.

Consistency Clustering: A Robust Algorithm for Group-wise Registration, Segmentation and Automatic Atlas Construction in Diffusion MRI [New]

Ziyan U., Sabuncu M.R., Grimson W.E.L., Westin C.

Dec-2009

NAC, LMI, NA-MIC, NCIGT

Int j Comput Vis 2009; 85(3):279-290.

Decoupling illumination from isosurface generation using 4D light transport

Banks D.C., Beason K.M.

Oct-2009

NAC

IEEE Trans Vis Comput Graph. 2009 Nov-Dec;15(6):1595-602.

Sampling and Visualizing Creases with Scale-Space Particles

Kindlmann G.L., San José Estépar R., Smith S.M., Westin C.

Oct-2009

NAC, LMI, NCIGT

IEEE Trans Vis Comput Graph. 2009 Nov-Dec;15(6):1415-24.

Regional white matter atrophy--based classification of multiple sclerosis in cross-sectional and longitudinal data

Sampat M.P., Berger A.M., Healy B.C., Hildenbrand P., Vass J., Meier D.S., Chitnis T., Weiner H.L., Bakshi R., Guttmann C.R.G.

Oct-2009

NAC, CNI

AJNR Am J Neuroradiol. 2009 Oct;30(9):1731-9.

MRI signal intensity based B-Spline nonrigid registration for pre- and intraoperative imaging during prostate brachytherapy

Oguro S., Tokuda J., Elhawary H., Haker S., Kikinis R., Tempany C.M.C., Hata N.

Oct-2009

SNR, NA-MIC, NAC, NCIGT, Prostate Group, SLICER

J Magn Reson Imaging. 2009 Oct 23;30(5):1052-105.

Local White Matter Geometry Indices from Diffusion Tensor Gradients

Savadjiev P., Kindlmann G., Bouix S., Shenton M.E., Westin C.

Sep-2009

NA-MIC, NAC, NCIGT

Int Conf Med Image Comput Comput Assist Interv. 2009;12(Pt 1):345–352.

Two-Tensor Tractography Using a Constrained Filter

Malcolm J.G., Shenton M.E., Rathi Y.

Sep-2009

PNL, NA-MIC, NAC, NCIGT

Int Conf Med Image Comput Comput Assist Interv. 2009;12(Pt 1):894-902.

Joint Segmentation of Image Ensembles via Latent Atlases

Riklin Raviv T., Van Leemput K., Wells III W.M., Golland P.

Sep-2009

NA-MIC, NAC, NCIGT

Int Conf Med Image Comput Comput Assist Interv. 2009;12(Pt 1):272–280.

Image-driven population analysis through mixture modeling

Sabuncu M.R., Balci S.K., Shenton M.E., Golland P.

Sep-2009

NAC, NA-MIC, PNL

IEEE Trans Med Imaging. 2009 Sep;28(9):1473-87.

Resolving crossings in the corticospinal tract by two-tensor streamline tractography: Method and clinical assessment using fMRI

Qazi A.A., Radmanesh A., O'Donnell L., Kindlmann G., Peled S., Whalen S., Westin C., Golby A.J.

Aug-2009

NAC, LMI, NCIGT

Neuroimage. 2009 Aug;47 Suppl 2:T98-106.

Adsorption of poly(methyl methacrylate) on concave Al₂O₃ surfaces in nanoporous membranes

Nunnery G., Hershkovits E., Tannenbaum A., Tannenbaum R.

Aug-2009

NAC, NA-MIC

Langmuir. 2009 Aug 18;25(16):9157-63.

Tractography Segmentation Using a Hierarchical Dirichlet Processes Mixture Model

Wang X., Grimson W.E.L., Westin C.

Jul-2009

NAC, NA-MIC, NCIGT

Inf Process Med Imaging. 2009;21:101-13.

Bayesian Registration via Local Image Regions: Information, Selection and Marginalization

Toews M., Wells III W.M.

Jul-2009

NCIGT, NAC

Inf Process Med Imaging. 2009;21:435-46.

A Unified Framework for MR Based Disease Classification

Pohl K.M., Sabuncu M.R.

Jul-2009

NAC, NA-MIC

Inf Process Med Imaging. 2009;21:300-13.

OpenIGTLink: an open network protocol for image-guided therapy environment

Tokuda J., Fischer G.S., Papademetris X., Yaniv Z., Ibanez L., Cheng P., Liu H., Blevins J., Arata J., Golby A., Kapur T., Pieper S., Burdette E.C., Fichtinger G., Tempany C.M., Hata N.

Jul-2009

NCIGT, NA-MIC, NAC, SNR

Int J Med Robot. 2009 Jul 20.

Exploratory fMRI Analysis without Spatial Normalization

Lashkari D., Golland P.

Jul-2009

NAC, NA-MIC

Inf Process Med Imaging. 2009;21:398-410.

A Non-rigid Registration Framework That Accommodates Resection and Retraction

Risholm P., Samset E., Talos I., Wells III W.M.

Jul-2009

NCIGT, NAC

Inf Process Med Imaging. 2009;21:447-58.

Multimodal Functional Imaging Using fMRI-Informed Regional EEG/MEG Source Estimation

Ou W., Nummenmaa A., Hamalainen M., Golland P.

Jul-2009

NAC, NA-MIC

Inf Process Med Imaging. 2009;21:88-100.

Encoding probabilistic brain atlases using Bayesian inference

Van Leemput K.

Jun-2009

NAC, NA-MIC

IEEE Trans Med Imaging. 2009 Jun;28(6):822-37.

Directional Functions for Orientation Distribution Estimation

Rathi Y., Michailovich O., Shenton M.E., Bouix S.

Jun-2009

PNL, NA-MIC, NAC

Med Image Anal. 2009 Jun;13(3):432-44.

Automated segmentation of hippocampal subfields from ultra-high resolution in vivo MRI

Van Leemput K., Bakkour A., Benner T., Wiggins G., Wald L.L., Augustinack J., Dickerson B.C., Golland P., Fischl B.

Jun-2009

NAC, NA-MIC

Hippocampus. 2009 Jun;19(6):549-57.

Range of motion after computed tomography-based simulation of intertrochanteric corrective osteotomy in cases of slipped capital femoral epiphysis: comparison of uniplanar flexion osteotomy and multiplanar flexion, valgisation, and rotational osteotomies

Mamisch T.C., Kim Y., Richolt J., Zilkens C., Kikinis R., Millis M., Kordelle J.

Jun-2009

NAC

J Pediatr Orthop. 2009 Jun;29(4):336-40.

Brain Regional Lesion Burden and Impaired Mobility in the Elderly

Moscufo N., Guttmann C.R.G., Meier D., Csapo I., Hildenbrand P.G., Healy B., Schmidt J., Wolfson L.

May-2009

NAC, CNI, SLICER

Neurobiol Aging. 2009 May 8.

Clinical application of curvilinear distraction osteogenesis for correction of mandibular deformities

Kaban L.B., Seldin E.B., Kikinis R., Yeshwant K., Padwa B.L., Troulis M.J.

May-2009

NAC, SLICER, SPL

J Oral Maxillofac Surg. 2009 May;67(5):996-1008.

Quantitative examination of a novel clustering method using magnetic resonance diffusion tensor tractography

Voineskos A., O'Donnell L., Lobaugh N., Markant D., Ameis S., Niethammer M., Mulsant B., Pollock B., Kennedy J., Westin C., Shenton M.

Apr-2009

PNL, LMI, NAC, NCIGT

Neuroimage. 2009 Apr 1;45(2):370-6.

Tract-based morphometry for white matter group analysis

O'Donnell L., Westin C., Golby A.J.

Apr-2009

NAC, LMI, NA-MIC, NCIGT

Neuroimage. 2009 Apr 15;45(3):832-44.

Exploring Functional Connectivity in fMRI via Clustering

Venkataraman A., Van Dijk K., Buckner R., Golland P.

Apr-2009

NA-MIC, NAC

IEEE International Conference on Acoustics, Speech and Signal Processing 2009; pp. 441-444.

Near-tubular fiber bundle segmentation for diffusion weighted imaging: segmentation through frame reorientation

Niethammer M., Zach C., Melonakos J., Tannenbaum A.

Mar-2009

NAC, NA-MIC

Neuroimage. 2009 Mar;45(1 Suppl):S123-32.

Choice of In Vivo Versus Idealized Velocity Boundary Conditions Influences Physiologically Relevant Flow Patterns in a Subject-Specific Simulation of Flow in the Human Carotid Bifurcation

Wake A.K., Oshinski J.N., Tannenbaum A.R., Giddens D.P.

Feb-2009

NAC, NA-MIC

J Biomech Eng. 2009 Feb;131(2):021013.

Computational neuroanatomy: ontology-based representation of neural components and connectivity

Rubin D., Talos I., Halle M., Musen M.A., Kikinis R.

Feb-2009

SPL, NAC, NCIGT

BMC Bioinformatics 2009; 10(Suppl 2):S3.

Sequential anisotropic multichannel Wiener filtering with Rician bias correction applied to 3D regularization of DWI data

Martin-Fernandez M., Muñoz-Moreno E., Cammoun L., Thiran J., Westin C., Alberola-López C.

Feb-2009

NAC, LMI

Med Image Anal. 2009 Feb;13(1):19-35.

A distributed spatio-temporal EEG/MEG inverse solver

Ou W., Hämäläinen M.S., Golland P.

Feb-2009

NAC, NA-MIC

Neuroimage. 2009 Feb 1;44(3):932-46.

Multimodal SPL Brain Atlas Data

Talos I., Wald L., Halle M., Kikinis R.

Feb-2009

NAC, Download Data, SPL

Multimodal SPL Brain Atlas Data 2009 February;

On the unimportance of constitutive models in computing brain deformation for image-guided surgery

Wittek A., Hawkins T., Miller K.

Feb-2009

NAC

Biomech Model Mechanobiol. 2009 Feb;8(1):77-84.

Spiny versus stubby: 3D reconstruction of human myenteric (type I) neurons

Lindig T.M., Kumar V., Kikinis R., Pieper S., Schrödl F., Neuhuber W.L., Brehmer A.

Jan-2009

SLICER, NA-MIC, NAC, SPL

Histochem Cell Biol. 2009 Jan;131(1):1-12.

Title

Authors

2008

Collection

Reference

Reduced interhemispheric connectivity in schizophrenia-tractography based segmentation of the corpus callosum

Kubicki M., Styner M., Bouix S., Gerig G., Markant D., Smith K., Kikinis R., McCarley R.W., Shenton M.E.

Dec-2008

PNL, NA-MIC, NAC, SPL

Schizophr Res. 2008 Dec;106(2-3):125-31.

An integrated system for planning, navigation and robotic assistance for skull base surgery

Xia T., Baird C., Jallo G., Hayes K., Nakajima N., Hata N., Kazanzides P.

Dec-2008

SLICER, NA-MIC, NAC, NCIGT, SNR, SPL

Int J Med Robot. 2008 Dec;4(4):321-30.

Image Guided Therapy in Slicer3: Planning for Image Guided Neurosurgery

Pace D., Hata N.

Nov-2008

NA-MIC, Download Data, NAC, NCIGT, SLICER, SNR

NCIGT-SNR Tutorial. 2008 November;

Localizing region-based active contours

Lankton S., Tannenbaum A.

Nov-2008

NA-MIC, NAC

IEEE Trans Image Process. 2008 Nov;17(11):2029-39.

Invariant Crease Lines for Topological and Structural Analysis of Tensor Fields

Tricoche X., Kindlmann G., Westin C.

Nov-2008

NAC, LMI, NCIGT

IEEE Trans Vis Comput Graph. 2008 Nov-Dec;14(6):1627-34.

An MRI study of age-related white and gray matter volume changes in the rhesus monkey

Wisco J.J., Killiany R.J., Guttmann C.R.G., Warfield S.K., Moss M.B., Rosene D.L.

Oct-2008

CNI, CRL, NAC, SLICER

Neurobiol Aging. 2008 Oct;29(10):1563-75.

TAC: Thresholding active contours

Dambreville S., Yezzi A., Lankton S., Tannenbaum A.

Oct-2008

NAC, NA-MIC

Proceedings of the 15th IEEE International Conference on Image Processing 2008;

A rhesus monkey reference label atlas for template driven segmentation

Wisco J.J., Rosene D.L., Killiany R.J., Moss M.B., Warfield S.K., Egorova S., Wu Y., Liptak Z., Warner J., Guttmann C.R.G.

Oct-2008

CNI, NAC, SLICER

J Med Primatol. 2008 Oct;37(5):250-60.

Effects of Registration Regularization and Atlas Sharpness on Segmentation Accuracy

Yeo B.T.T., Sabuncu M.R., Desikan R., Fischl B., Golland P.

Oct-2008

NA-MIC, NAC

Med Image Anal. 2008 Oct;12(5):603-15.

Robust 3D Pose Estimation and Efficient 2D Region-Based Segmentation from a 3D Shape Prior

Dambreville S., Sandhu R., Yezzi A., Tannenbaum A.

Oct-2008

NAC, NA-MIC

Proceedings of the 10th European Conference on Computer Vision 2008;

Software Strategy for Robotic Transperineal Prostate Therapy in Closed-Bore MRI

Tokuda J., Fischer G.S., Csoma C., DiMaio S.P., Gobbi D.G., Fichtinger G., Tempany C.M., Hata N.

Sep-2008

NCIGT, NA-MIC, NAC, Prostate Group, SLICER, SNR

Int Conf Med Image Comput Comput Assist Interv. 2008;11(Pt 2):701-709.

Label Space: A Coupled Multi-shape Representation

Malcolm J.G., Rathi Y., Shenton M.E., Tannenbaum A.

Sep-2008

NAC, NA-MIC, PNL

Int Conf Med Image Comput Comput Assist Interv. 2008;11(Pt 2):416-424.

Findings in Schizophrenia by Tract-Oriented DT-MRI Analysis

Maddah M., Kubicki M., Wells III W.M., Westin C., Shenton M.E., Grimson W.E.L.

Sep-2008

NAC, LMI, PNL

Int Conf Med Image Comput Comput Assist Interv. 2008;11(Pt 1):917-924.

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Neuroimage Analysis Center "understanding the human brain through imaging"

The Publication Database hosted by SPL

Neuroimage Analysis Center
"understanding the human brain through imaging"